Transcript: lnc-FAM50B-6:8

Basic information

LNCipedia transcript ID: lnc-FAM50B-6:8 
LNCipedia gene ID: lnc-FAM50B-6
Location (hg38): chr6:3752076-3756188
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4113 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000270504.1|MICT00000296206.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 0.3958 non-coding 
CPAT coding probability 28.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM50B-6:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FAM50B-6:8
5.0 lnc-FAM50B-6:8
5.1 lnc-PRPF4B-30:7
5.2 lnc-FAM50B-6:8