Transcript: lnc-FAM71E1-2:6

Basic information

LNCipedia transcript ID: lnc-FAM71E1-2:6 
LNCipedia gene ID: lnc-FAM71E1-2
Location (hg38): chr19:50490327-50500301
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 800 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT067338
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -8.7745 non-coding 
CPAT coding probability 3.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM71E1-2:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-JOSD2-3:1
4.0 lnc-JOSD2-3:1
4.1 lnc-FAM71E1-2:6
5.0 lnc-FAM71E1-2:6
5.1 lnc-FAM71E1-2:6
5.2 lnc-FAM71E1-2:6