Transcript: lnc-FAM71E2-1:3

Basic information

LNCipedia transcript ID: lnc-FAM71E2-1:3 
LNCipedia gene ID: lnc-FAM71E2-1
Location (hg38): chr19:55354140-55354687
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 548 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT068029
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -38.9061 non-coding 
CPAT coding probability 57.16% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-FAM71E2-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM71E2-1:3
4.0 lnc-FAM71E2-1:3
4.1 lnc-FAM71E2-1:3
5.0 lnc-FAM71E2-1:3
5.1 lnc-SYT5-12:3
5.2 lnc-FAM71E2-1:3