Transcript: lnc-FAM71E2-1:4

Basic information

LNCipedia transcript ID: lnc-FAM71E2-1:4 
LNCipedia gene ID: lnc-FAM71E2-1
Location (hg38): chr19:55352179-55353689
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 319 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT068026
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -149.3651 non-coding 
CPAT coding probability 0.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM71E2-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM71E2-1:4
4.0 lnc-FAM71E2-1:4
4.1 lnc-FAM71E2-1:4
5.0 lnc-FAM71E2-1:4
5.1 lnc-SYT5-12:4
5.2 lnc-FAM71E2-1:4