Transcript: lnc-FAM72B-18:1

Basic information

LNCipedia transcript ID: lnc-FAM72B-18:1 
LNCipedia gene ID: lnc-FAM72B-18
Ensembl Gene ID: ENSG00000234998
Ensembl Transcript ID: ENST00000426275
Location (hg38): chr1:121087528-121116676
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 459 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000426275.1
Alternative gene names: ENSG00000234998.1; RP11-439A17.10; AC244453.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-FAM72B-18:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-FAM72B-18:1
5.1 lnc-FAM72B-18:1
5.2 lnc-FAM72B-18:1