Transcript: lnc-FAM76A-1:4

Basic information

LNCipedia transcript ID: lnc-FAM76A-1:4 
LNCipedia gene ID: lnc-FAM76A-1
Ensembl Gene ID: ENSG00000225886
Ensembl Transcript ID: ENST00000628586
Location (hg38): chr1:27669490-27691032
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 639 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000628586.2
Alternative gene names: ENSG00000225886.3; RP11-288L9.4; AL445490.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 10.2456 non-coding 
CPAT coding probability 6.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM76A-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-FAM76A-1:4
4.1 lnc-FAM76A-1:4
5.0 lnc-FAM76A-1:4
5.1 lnc-SMPDL3B-5:6
5.2 lnc-FAM76A-1:4