Transcript: lnc-FAM86B2-58:3

Basic information

LNCipedia transcript ID: lnc-FAM86B2-58:3 
LNCipedia gene ID: lnc-FAM86B2-58
RefSeq ID: NR_047662
Location (hg38): chr8:12537079-12665611
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3982 bp
Exons: 9
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT125160; NR_047662; NR_047662.2
Alternative gene names: LOC729732


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 65.0433 coding 
CPAT coding probability 95.67% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-FAM86B2-58:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LONRF1-2:5
4.0 lnc-LONRF1-2:5
4.1 lnc-LONRF1-2:5
5.0 lnc-LONRF1-2:5
5.1 lnc-PINX1-58:3
5.2 lnc-FAM86B2-58:3