Transcript: lnc-FAM86B2-58:5

Basic information

LNCipedia transcript ID: lnc-FAM86B2-58:5 
LNCipedia gene ID: lnc-FAM86B2-58
Ensembl Gene ID: ENSG00000283674
Ensembl Transcript ID: ENST00000637678
Location (hg38): chr8:12594970-12665514
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1770 bp
Exons: 6
Sources: Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000637678.1
Alternative gene names: ENSG00000283674.1; RP11-419I17.1; ENSG00000283674.2; AC068587.6; AC068587.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 23.7884 non-coding 
CPAT coding probability 99.79% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-FAM86B2-58:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-LONRF1-2:7
5.0 lnc-LONRF1-2:7
5.1 lnc-PINX1-58:5
5.2 lnc-FAM86B2-58:5