Transcript: lnc-FAM86B2-58:6

Basic information

LNCipedia transcript ID: lnc-FAM86B2-58:6 
LNCipedia gene ID: lnc-FAM86B2-58
Location (hg38): chr8:12594981-12665350
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2162 bp
Exons: 8
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000500410; NONHSAT125166
Alternative gene names: ENSG00000247397; AC068587.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 30.1264 non-coding 
CPAT coding probability 22.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM86B2-58:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LONRF1-2:3
3.1 lnc-LONRF1-2:3
4.0 lnc-LONRF1-2:3
4.1 lnc-LONRF1-2:3
5.0 lnc-LONRF1-2:3
5.1 lnc-PINX1-58:6
5.2 lnc-FAM86B2-58:6