Transcript: lnc-FAM8A1-2:3

Basic information

LNCipedia transcript ID: lnc-FAM8A1-2:3 
LNCipedia gene ID: lnc-FAM8A1-2
Location (hg38): chr6:17707007-17711157
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 724 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT107930
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -32.7028 non-coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM8A1-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM8A1-2:3
4.0 lnc-FAM8A1-2:3
4.1 lnc-FAM8A1-2:3
5.0 lnc-FAM8A1-2:3
5.1 lnc-GMNN-52:9
5.2 lnc-FAM8A1-2:3