Transcript: lnc-FAM8A1-2:9

Basic information

LNCipedia transcript ID: lnc-FAM8A1-2:9 
LNCipedia gene ID: lnc-FAM8A1-2
RefSeq ID: NR_134618
Location (hg38): chr6:17707043-17711027
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 558 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_134618.1
Alternative gene names: LOC105374952


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -38.3735 non-coding 
CPAT coding probability 0.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM8A1-2:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-GMNN-52:10
5.1 lnc-GMNN-52:10
5.2 lnc-FAM8A1-2:9