Transcript: lnc-FAM92B-5:3

Basic information

LNCipedia transcript ID: lnc-FAM92B-5:3 
LNCipedia gene ID: lnc-FAM92B-5
Ensembl Gene ID: ENSG00000275088
Ensembl Transcript ID: ENST00000621095
Location (hg38): chr16:85142696-85146001
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3306 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000621095.1
Alternative gene names: ENSG00000275088.1; RP11-442O1.3; AC026469.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -32.9716 non-coding 
CPAT coding probability 3.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM92B-5:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-FAM92B-5:3
4.1 lnc-FAM92B-5:3
5.0 lnc-FAM92B-5:3
5.1 lnc-MTHFSD-28:3
5.2 lnc-FAM92B-5:3