Transcript: lnc-FAM98B-7:1

Basic information

LNCipedia transcript ID: lnc-FAM98B-7:1 
LNCipedia gene ID: lnc-FAM98B-7
Ensembl Gene ID: ENSG00000259278
Ensembl Transcript ID: ENST00000560709
Location (hg38): chr15:39019233-39024918
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 574 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000560709.1; RP11-62C7.2-001; OTTHUMT00000418261.1; NONHSAT041729
Alternative gene names: ENSG00000259278.1; RP11-62C7.2; OTTHUMG00000172390.1; AC087878.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -195.481 non-coding 
CPAT coding probability 0.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM98B-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C15orf54-3:1
4.0 lnc-C15orf54-3:1
4.1 lnc-C15orf54-3:1
5.0 lnc-C15orf54-3:1
5.1 lnc-TMEM62-98:1
5.2 lnc-FAM98B-7:1