Transcript: lnc-FAN1-1:3

Basic information

LNCipedia transcript ID: lnc-FAN1-1:3 
LNCipedia gene ID: lnc-FAN1-1
Location (hg38): chr15:31035778-31037363
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1056 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT041422
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -80.8587 non-coding 
CPAT coding probability 10.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAN1-1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAN1-1:3
4.0 lnc-FAN1-1:3
4.1 lnc-FAN1-1:3
5.0 lnc-FAN1-1:3
5.1 lnc-SNRPN-130:3
5.2 lnc-FAN1-1:3