Transcript: lnc-FANCD2OS-1:8

Basic information

LNCipedia transcript ID: lnc-FANCD2OS-1:8 
LNCipedia gene ID: lnc-FANCD2OS-1
Location (hg38): chr3:10081320-10085828
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 417 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT087879
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 19.0748 non-coding 
CPAT coding probability 5.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FANCD2OS-1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C3orf24-1:4
4.0 lnc-C3orf24-1:4
4.1 lnc-C3orf24-1:4
5.0 lnc-C3orf24-1:4
5.1 lnc-FANCD2OS-1:4
5.2 lnc-FANCD2OS-1:8