Transcript: lnc-FARSB-1:1

Basic information

LNCipedia transcript ID: lnc-FARSB-1:1 
LNCipedia gene ID: lnc-FARSB-1
Location (hg38): chr2:222566905-222569719
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2815 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000568928.1; RP11-16P6.1-001; OTTHUMT00000431769.1; NONHSAT077129
Alternative gene names: ENSG00000261428.1; RP11-16P6.1; OTTHUMG00000176330.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -3.9514 non-coding 
CPAT coding probability 0.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FARSB-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FARSB-1:1
4.0 lnc-FARSB-1:1
4.1 lnc-FARSB-1:1
5.0 lnc-FARSB-1:1
5.1 lnc-FARSB-1:1
5.2 lnc-FARSB-1:1