Transcript: lnc-FAT3-5:6

Basic information

LNCipedia transcript ID: lnc-FAT3-5:6 
LNCipedia gene ID: lnc-FAT3-5
Location (hg38): chr11:91794346-91800884
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 953 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00019969; NONHSAT023606
Alternative gene names: XLOC_009248; linc-FAT3-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 58.764 non-coding 
CPAT coding probability 0.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-FAT3-5:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-201M22.1.1-1:6
3.1 lnc-RP11-201M22.1.1-1:7
4.0 lnc-RP11-201M22.1.1-1:7
4.1 lnc-RP11-201M22.1.1-1:7
5.0 lnc-RP11-201M22.1.1-1:7
5.1 lnc-TRIM49C-9:6
5.2 lnc-FAT3-5:6