Transcript: lnc-FAT3-5:8

Basic information

LNCipedia transcript ID: lnc-FAT3-5:8 
LNCipedia gene ID: lnc-FAT3-5
Location (hg38): chr11:91794362-91800350
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 452 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000577699.1; RP11-201M22.1-002; OTTHUMT00000447345.1
Alternative gene names: ENSG00000255332.2; RP11-201M22.1; OTTHUMG00000167330.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -103.7915 non-coding 
CPAT coding probability 0.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAT3-5:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-201M22.1.1-1:8
4.0 lnc-RP11-201M22.1.1-1:8
4.1 lnc-RP11-201M22.1.1-1:8
5.0 lnc-RP11-201M22.1.1-1:8
5.1 lnc-TRIM49C-9:8
5.2 lnc-FAT3-5:8