Transcript: lnc-FBN1-3:4

Basic information

LNCipedia transcript ID: lnc-FBN1-3:4 
LNCipedia gene ID: lnc-FBN1-3
Ensembl Gene ID: ENSG00000259488
Ensembl Transcript ID: ENST00000612262
Location (hg38): chr15:48327566-48331846
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4242 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000612262.1
Alternative gene names: ENSG00000259488.2; RP11-154J22.1; AC023355.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 7.1154 non-coding 
CPAT coding probability 7.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FBN1-3:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-FBN1-3:4
4.1 lnc-FBN1-3:4
5.0 lnc-FBN1-3:4
5.1 lnc-SERINC4-57:8
5.2 lnc-FBN1-3:4