Transcript: lnc-FBXL18-1:9

Basic information

LNCipedia transcript ID: lnc-FBXL18-1:9 
LNCipedia gene ID: lnc-FBXL18-1
Ensembl Gene ID: ENSG00000234432
Ensembl Transcript ID: ENST00000610122
Location (hg38): chr7:5426277-5428927
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2651 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000610122.1
Alternative gene names: ENSG00000234432.3; RP11-1275H24.1; ENSG00000234432.4; AC092171.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -16.0664 non-coding 
CPAT coding probability 88.10% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-FBXL18-1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FBXL18-1:2
4.0 lnc-AC092171.1-1:4
4.1 lnc-AC092171.1-1:4
5.0 lnc-AC092171.1-1:4
5.1 lnc-FBXL18-1:6
5.2 lnc-FBXL18-1:9