Transcript: lnc-FBXL5-2:2

Basic information

LNCipedia transcript ID: lnc-FBXL5-2:2 
LNCipedia gene ID: lnc-FBXL5-2
Ensembl Gene ID: ENSG00000249252
Ensembl Transcript ID: ENST00000513384
Location (hg38): chr4:15006447-15227960
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 537 bp
Exons: 5
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000513384.1; RP11-665G4.1-002; OTTHUMT00000359985.1; NONHSAT095615
Alternative gene names: ENSG00000249252.1; RP11-665G4.1; OTTHUMG00000160132.3; ENSG00000249252.5; AC098829.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -141.6674 non-coding 
CPAT coding probability 1.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FBXL5-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FBXL5-2:2
4.0 lnc-FBXL5-2:2
4.1 lnc-FBXL5-2:2
5.0 lnc-FBXL5-2:2
5.1 lnc-AFAP1-65:2
5.2 lnc-FBXL5-2:2