Transcript: lnc-FBXO17-5:3

Basic information

LNCipedia transcript ID: lnc-FBXO17-5:3 
LNCipedia gene ID: lnc-FBXO17-5
Location (hg38): chr19:38935336-38938632
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3297 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT066267; ENST00000599320.1
Alternative gene names: ENSG00000269486.1; CTC-360G5.9


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 39.015 non-coding 
CPAT coding probability 22.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FBXO17-5:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SIRT2-5:1
4.0 lnc-SIRT2-5:1
4.1 lnc-SIRT2-5:1
5.0 lnc-SIRT2-5:1
5.1 lnc-FBXO17-5:1
5.2 lnc-FBXO17-5:3