Transcript: lnc-FBXO28-1:10

Basic information

LNCipedia transcript ID: lnc-FBXO28-1:10 
LNCipedia gene ID: lnc-FBXO28-1
Location (hg38): chr1:223992760-224006933
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 14174 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000263182.1|ENCT00000017982.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 38.299 non-coding 
CPAT coding probability 0.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FBXO28-1:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FBXO28-1:10
5.0 lnc-FBXO28-1:10
5.1 lnc-CAPN2-6:2
5.2 lnc-FBXO28-1:10