Transcript: lnc-FBXO8-5:3

Basic information

LNCipedia transcript ID: lnc-FBXO8-5:3 
LNCipedia gene ID: lnc-FBXO8-5
Location (hg38): chr4:173924209-173990851
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1822 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00007446
Alternative gene names: XLOC_004169; linc-MORF4-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -17.5344 non-coding 
CPAT coding probability 1.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FBXO8-5:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FBXO8-5:2
3.1 lnc-FBXO8-5:3
4.0 lnc-FBXO8-5:3
4.1 lnc-FBXO8-5:3
5.0 lnc-FBXO8-5:3
5.1 lnc-HPGD-13:2
5.2 lnc-FBXO8-5:3