Transcript: lnc-FBXO9-3:1

Basic information

LNCipedia transcript ID: lnc-FBXO9-3:1 
LNCipedia gene ID: lnc-FBXO9-3
Ensembl Gene ID: ENSG00000271367
Ensembl Transcript ID: ENST00000605281
Location (hg38): chr6:53350158-53350705
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 548 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT113170; ENST00000605281.1
Alternative gene names: ENSG00000271367.1; RP3-483K16.4; AL034374.2; AL034374.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -112.2433 non-coding 
CPAT coding probability 0.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FBXO9-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FBXO9-3:1
4.0 lnc-FBXO9-3:1
4.1 lnc-FBXO9-3:1
5.0 lnc-FBXO9-3:1
5.1 lnc-EFHC1-14:1
5.2 lnc-FBXO9-3:1