Transcript: lnc-FBXW11-2:2

Basic information

LNCipedia transcript ID: lnc-FBXW11-2:2 
LNCipedia gene ID: lnc-FBXW11-2
Location (hg38): chr5:171725831-171736329
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 742 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00011086; NONHSAT105088
Alternative gene names: XLOC_005081; linc-KCNMB1-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -126.7109 non-coding 
CPAT coding probability 1.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FBXW11-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FBXW11-2:2
3.1 lnc-FBXW11-2:2
4.0 lnc-FBXW11-2:2
4.1 lnc-FBXW11-2:2
5.0 lnc-FBXW11-2:2
5.1 lnc-PDLIM7-95:2
5.2 lnc-FBXW11-2:2