Transcript: lnc-FCGR1B-9:1

Basic information

LNCipedia transcript ID: lnc-FCGR1B-9:1 
LNCipedia gene ID: lnc-FCGR1B-9
Ensembl Gene ID: ENSG00000227193
Ensembl Transcript ID: ENST00000427872
Location (hg38): chr1:121118126-121146826
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 494 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000427872.1
Alternative gene names: ENSG00000227193.2; RP11-439A17.4; AC244453.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 6.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-FCGR1B-9:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-FCGR1B-9:1
5.1 lnc-FCGR1B-9:1
5.2 lnc-FCGR1B-9:1