Transcript: lnc-FCN1-1:6

Basic information

LNCipedia transcript ID: lnc-FCN1-1:6 
LNCipedia gene ID: lnc-FCN1-1
Location (hg38): chr9:134819177-134872636
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 6564 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000110062.1|ENCT00000461937.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 358.7673 coding 
CPAT coding probability 20.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-FCN1-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FCN1-1:6
5.0 lnc-FCN1-1:6
5.1 lnc-CAMSAP1-17:4
5.2 lnc-FCN1-1:6