Transcript: lnc-FER-17:1

Basic information

LNCipedia transcript ID: lnc-FER-17:1 
LNCipedia gene ID: lnc-FER-17
Location (hg38): chr5:109409895-109410612
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 718 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000076976.1|FTMT22000006450.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -106.2818 non-coding 
CPAT coding probability 2.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FER-17:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FER-17:1
5.0 lnc-FER-17:1
5.1 lnc-AP3S1-88:1
5.2 lnc-FER-17:1