Transcript: lnc-FFAR2-2:2

Basic information

LNCipedia transcript ID: lnc-FFAR2-2:2 
LNCipedia gene ID: lnc-FFAR2-2
Location (hg38): chr19:35436781-35438387
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1519 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000039139.1|MICT00000173667.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 1.0614 non-coding 
CPAT coding probability 0.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FFAR2-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FFAR2-2:2
5.0 lnc-FFAR2-2:2
5.1 lnc-GPR42-8:2
5.2 lnc-FFAR2-2:2