Transcript: lnc-FGF3-28:1

Basic information

LNCipedia transcript ID: lnc-FGF3-28:1 
LNCipedia gene ID: lnc-FGF3-28
Ensembl Gene ID: ENSG00000260348
Ensembl Transcript ID: ENST00000563932
Location (hg38): chr11:69909184-69910994
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 385 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000563932.1
Alternative gene names: ENSG00000260348.1; RP11-643C9.1; AP007216.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 3.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-FGF3-28:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-KMT5B-28:1
5.1 lnc-KMT5B-28:1
5.2 lnc-FGF3-28:1