Transcript: lnc-FGF3-2:2

Basic information

LNCipedia transcript ID: lnc-FGF3-2:2 
LNCipedia gene ID: lnc-FGF3-2
Location (hg38): chr11:70056232-70065371
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1753 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00019173
Alternative gene names: XLOC_009487; linc-FGF3-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.8229 non-coding 
CPAT coding probability 22.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FGF3-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FGF3-2:2
3.1 lnc-FGF3-2:2
4.0 lnc-FGF3-2:2
4.1 lnc-FGF3-2:2
5.0 lnc-FGF3-2:2
5.1 lnc-KMT5B-32:2
5.2 lnc-FGF3-2:2