Transcript: lnc-FGF3-6:1

Basic information

LNCipedia transcript ID: lnc-FGF3-6:1 
LNCipedia gene ID: lnc-FGF3-6
Location (hg38): chr11:70566387-70571323
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 421 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000445654.1; AP001271.5-001; OTTHUMT00000327642.1; NONHSAT022666
Alternative gene names: ENSG00000224119.1; AP001271.5; OTTHUMG00000152740.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -115.806 non-coding 
CPAT coding probability 4.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FGF3-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DHCR7-2:1
4.0 lnc-DHCR7-2:1
4.1 lnc-DHCR7-2:1
5.0 lnc-DHCR7-2:1
5.1 lnc-KMT5B-43:1
5.2 lnc-FGF3-6:1