Transcript: lnc-FGF9-13:3

Basic information

LNCipedia transcript ID: lnc-FGF9-13:3 
LNCipedia gene ID: lnc-FGF9-13
Location (hg38): chr13:22068044-22068573
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 530 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT032417; FPKM1_group_7478_transcript_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -302.0212 non-coding 
CPAT coding probability 1.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FGF9-13:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FGF9-13:3
4.0 lnc-FGF9-13:3
4.1 lnc-FGF9-13:3
5.0 lnc-FGF9-13:3
5.1 lnc-GTF3A-102:3
5.2 lnc-FGF9-13:3