Transcript: lnc-FGFR1OP-2:3

Basic information

LNCipedia transcript ID: lnc-FGFR1OP-2:3 
LNCipedia gene ID: lnc-FGFR1OP-2
Location (hg38): chr6:166388136-166389920
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1785 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT116047
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.7923 non-coding 
CPAT coding probability 1.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FGFR1OP-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FGFR1OP-2:3
4.0 lnc-FGFR1OP-2:3
4.1 lnc-FGFR1OP-2:3
5.0 lnc-FGFR1OP-2:3
5.1 lnc-SYTL3-70:8
5.2 lnc-FGFR1OP-2:3