Transcript: lnc-FGFR1OP-2:6

Basic information

LNCipedia transcript ID: lnc-FGFR1OP-2:6 
LNCipedia gene ID: lnc-FGFR1OP-2
Location (hg38): chr6:166383178-166389989
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4884 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000261420.1|ENCT00000380358.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 8.7923 non-coding 
CPAT coding probability 0.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FGFR1OP-2:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FGFR1OP-2:6
5.0 lnc-FGFR1OP-2:6
5.1 lnc-SYTL3-70:3
5.2 lnc-FGFR1OP-2:6