Transcript: lnc-FGFR1OP2-6:1

Basic information

LNCipedia transcript ID: lnc-FGFR1OP2-6:1 
LNCipedia gene ID: lnc-FGFR1OP2-6
Location (hg38): chr12:27034407-27038948
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 4542 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA286:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 5.0033 non-coding 
CPAT coding probability 4.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FGFR1OP2-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-FGFR1OP2-6:1
4.1 lnc-FGFR1OP2-6:1
5.0 lnc-FGFR1OP2-6:1
5.1 lnc-KIAA1551-66:1
5.2 lnc-FGFR1OP2-6:1