Transcript: lnc-FGFR1OP2-6:2

Basic information

LNCipedia transcript ID: lnc-FGFR1OP2-6:2 
LNCipedia gene ID: lnc-FGFR1OP2-6
Ensembl Gene ID: ENSG00000275764
Ensembl Transcript ID: ENST00000620519
Location (hg38): chr12:27037100-27038960
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1861 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000620519.1
Alternative gene names: ENSG00000275764.1; RP11-582E3.6; AC092747.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 1.1146 non-coding 
CPAT coding probability 0.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FGFR1OP2-6:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-FGFR1OP2-6:2
4.1 lnc-FGFR1OP2-6:2
5.0 lnc-FGFR1OP2-6:2
5.1 lnc-KIAA1551-66:2
5.2 lnc-FGFR1OP2-6:2