Transcript: lnc-FKBP14-2:1

Basic information

LNCipedia transcript ID: lnc-FKBP14-2:1 
LNCipedia gene ID: lnc-FKBP14-2
Ensembl Gene ID: ENSG00000227017
Ensembl Transcript ID: ENST00000430537
Location (hg38): chr7:30176387-30179014
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 674 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00013148; ENST00000430537; ENST00000430537.1; AC007036.6-001; OTTHUMT00000327706.1; NONHSAT119855
Alternative gene names: XLOC_006398; linc-FKBP14-2; ENSG00000227017; AC007036.6; ENSG00000227017.1; OTTHUMG00000152762.1; AC007036.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -51.1287 non-coding 
CPAT coding probability 5.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FKBP14-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FKBP14-1:1
3.1 lnc-FKBP14-2:1
4.0 lnc-FKBP14-2:1
4.1 lnc-FKBP14-2:1
5.0 lnc-FKBP14-2:1
5.1 lnc-PDE1C-20:1
5.2 lnc-FKBP14-2:1