Transcript: lnc-FLRT1-2:1

Basic information

LNCipedia transcript ID: lnc-FLRT1-2:1 
LNCipedia gene ID: lnc-FLRT1-2
Ensembl Gene ID: ENSG00000256824
Ensembl Transcript ID: ENST00000537170
Location (hg38): chr11:64035970-64103653
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 650 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000537170.1; RP11-21A7A.2-002; OTTHUMT00000396285.1; NONHSAT021932
Alternative gene names: ENSG00000256824.1; RP11-21A7A.2; OTTHUMG00000167787.1; AP000721.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 89.4004 coding 
CPAT coding probability 1.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-FLRT1-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FLRT1-2:1
4.0 lnc-FLRT1-2:1
4.1 lnc-FLRT1-2:1
5.0 lnc-FLRT1-2:1
5.1 lnc-PPP2R5B-69:2
5.2 lnc-FLRT1-2:1