Transcript: lnc-FLRT2-1:4

Basic information

LNCipedia transcript ID: lnc-FLRT2-1:4 
LNCipedia gene ID: lnc-FLRT2-1
Ensembl Gene ID: ENSG00000258945
Ensembl Transcript ID: ENST00000553678
Location (hg38): chr14:85528599-85529386
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 643 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000553678.1
Alternative gene names: ENSG00000258945.1; RP11-497E19.2; AL049775.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -126.8637 non-coding 
CPAT coding probability 47.12% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-FLRT2-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RP11-497E19.2.1-1:9
4.1 lnc-RP11-497E19.2.1-1:9
5.0 lnc-RP11-497E19.2.1-1:9
5.1 lnc-FLRT2-1:2
5.2 lnc-FLRT2-1:4