Transcript: lnc-FLRT2-1:5

Basic information

LNCipedia transcript ID: lnc-FLRT2-1:5 
LNCipedia gene ID: lnc-FLRT2-1
Location (hg38): chr14:85528779-85529281
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 358 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00023024
Alternative gene names: XLOC_010890; linc-FLRT2-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -126.8637 non-coding 
CPAT coding probability 11.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FLRT2-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FLRT2-1:1
3.1 lnc-FLRT2-1:1
4.0 lnc-RP11-497E19.2.1-1:10
4.1 lnc-RP11-497E19.2.1-1:10
5.0 lnc-RP11-497E19.2.1-1:10
5.1 lnc-FLRT2-1:3
5.2 lnc-FLRT2-1:5