Transcript: lnc-FNDC1-7:1

Basic information

LNCipedia transcript ID: lnc-FNDC1-7:1 
LNCipedia gene ID: lnc-FNDC1-7
Location (hg38): chr6:159085897-159087341
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 385 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT115830
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -138.2371 non-coding 
CPAT coding probability 0.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FNDC1-7:1 no no no no

Available literature

  1. Ding (2015), Genetics of RA susceptibility, what comes next?, RMD Open


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FNDC1-7:1
4.0 lnc-FNDC1-7:1
4.1 lnc-FNDC1-7:1
5.0 lnc-FNDC1-7:1
5.1 lnc-SYTL3-149:1
5.2 lnc-FNDC1-7:1