Transcript: lnc-FNDC10-1:4

Basic information

LNCipedia transcript ID: lnc-FNDC10-1:4 
LNCipedia gene ID: lnc-FNDC10-1
Location (hg38): chr1:1613758-1615785
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2028 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000272106.1|ENST00000607222.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 51.7438 non-coding 
CPAT coding probability 0.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-FNDC10-1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-345P4.5.1-1:6
5.0 lnc-RP11-345P4.5.1-1:6
5.1 lnc-CLSTN1-131:4
5.2 lnc-FNDC10-1:4