Transcript: lnc-FNDC10-1:5

Basic information

LNCipedia transcript ID: lnc-FNDC10-1:5 
LNCipedia gene ID: lnc-FNDC10-1
Location (hg38): chr1:1613761-1615774
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2014 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA96:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 51.7438 non-coding 
CPAT coding probability 0.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-FNDC10-1:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RP11-345P4.5.1-1:3
4.1 lnc-RP11-345P4.5.1-1:3
5.0 lnc-RP11-345P4.5.1-1:3
5.1 lnc-CLSTN1-131:5
5.2 lnc-FNDC10-1:5