Transcript: lnc-FOXA1-4:2

Basic information

LNCipedia transcript ID: lnc-FOXA1-4:2 
LNCipedia gene ID: lnc-FOXA1-4
Location (hg38): chr14:37595024-37596059
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 392 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT036466
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -89.2131 non-coding 
CPAT coding probability 17.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FOXA1-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC25A21-4:1
4.0 lnc-SLC25A21-4:1
4.1 lnc-SLC25A21-4:1
5.0 lnc-SLC25A21-4:1
5.1 lnc-EFS-181:1
5.2 lnc-FOXA1-4:2