Transcript: lnc-FOXA2-7:4

Basic information

LNCipedia transcript ID: lnc-FOXA2-7:4 
LNCipedia gene ID: lnc-FOXA2-7
Location (hg38): chr20:22401182-22420369
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 691 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT078978
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -106.9998 non-coding 
CPAT coding probability 1.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FOXA2-7:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FOXA2-7:4
4.0 lnc-FOXA2-7:4
4.1 lnc-FOXA2-7:4
5.0 lnc-FOXA2-7:4
5.1 lnc-CST4-37:10
5.2 lnc-FOXA2-7:4