Transcript: lnc-FOXD1-3:11

Basic information

LNCipedia transcript ID: lnc-FOXD1-3:11 
LNCipedia gene ID: lnc-FOXD1-3
RefSeq ID: NR_134291
Location (hg38): chr5:73195290-73201961
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2359 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_134291.1
Alternative gene names: LOC340090


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -45.8471 non-coding 
CPAT coding probability 3.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FOXD1-3:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-ANKRD34B-140:11
5.1 lnc-ANKRD34B-140:11
5.2 lnc-FOXD1-3:11