Transcript: lnc-FOXD4L5-25:5

Basic information

LNCipedia transcript ID: lnc-FOXD4L5-25:5 
LNCipedia gene ID: lnc-FOXD4L5-25
Ensembl Gene ID: ENSG00000234665
Ensembl Transcript ID: ENST00000445604
Location (hg38): chr9:62865597-62898087
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1602 bp
Exons: 5
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT131542; ENST00000445604.2; ENST00000445604.6
Alternative gene names: ENSG00000234665.4; RP11-262H14.3; ENSG00000234665.8; AL512625.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 61.3852 coding 
CPAT coding probability 26.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-FOXD4L5-25:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM75A7-4:7
4.0 lnc-FAM75A7-4:7
4.1 lnc-FAM75A7-4:7
5.0 lnc-FAM75A7-4:7
5.1 lnc-ZFAND5-79:5
5.2 lnc-FOXD4L5-25:5