Transcript: lnc-FOXD4L5-35:3

Basic information

LNCipedia transcript ID: lnc-FOXD4L5-35:3 
LNCipedia gene ID: lnc-FOXD4L5-35
Location (hg38): chr9:62375755-62376838
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 969 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1417:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 86.6447 coding 
CPAT coding probability 13.92% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-FOXD4L5-35:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-FAM27E1.1-5:7
4.1 lnc-FAM27E1.1-5:7
5.0 lnc-FAM27E1.1-5:7
5.1 lnc-ZFAND5-89:3
5.2 lnc-FOXD4L5-35:3